PUBLICATIONS
‡ Corresponding author
† Equal contribution
M Lodi, RI Joh‡, Transcriptional coregulation among diabetes-associated pathways by genome organization (submitted)
M Beltran and RI Joh‡, MAGE: Monte Carlo method for Aberrant Gene Expression (submitted)
J Hanai, N Ide, J Zhang, G Bonilla, R Morris, AOD Gulka, RI Joh, E Shuto , M Abuduli , T Shoida,RI Sadreyev, C Benes, VP Sukhatme, and M Motamedi, Epigenetic reprogramming of mesenchymalcells by inhibition of SUV39H1/H2 (submitted)
R Raychowdhury, W Ding, N Donmark, L Yang, S Shen, R Carlson, RI Joh, N Harcohen, YY Lan,cGAS in concert with p53 in CRM1-dependent nuclear DNA export (submitted)
RI Joh‡, MJ Aryee, M Lawrence, M Motamedi‡, Gene clustering drives co-regulation of disparate biological pathways in eukaryotes (doi: https://doi.org/10.1101/2021.04.17.440292) (submitted)
P Ghimire, RI Joh‡, 2025, Modeling Publications the copy number of HSATII repeats in human pericentromere,
International Journal of Molecular Sciences, 26(10), 4751
X Zhang, Z Wang, O Taohui, B Wang, RI Joh, S Huang, 2025, Targeting Wnt/beta-catenin activationin combination with temozolomide leads to glioblastoma inhibition and long-term survival in mice,Genes & Diseases, https://doi.org/10.1016/j.gendis.2025.101624
P Glass, D Rhoades, G Bohannon, RI Joh, I Pretzer-Aboff, SH Park, D Joung, 2025, A synchronizedevent-cue feedback loop integrating a 3D printed wearable flexible sensor-tactor platform, Biosensors and Bioelectronics, 273, 117161
B Daul, R Martin, P Glass, R Moonesi Rad, RI Joh, F Meng, D Joung, 2025, 3D printed magneticorigami scaffold for guided tissue assembly, Advanced Materials Interfaces,https://doi.org/10.1002/admi.20240090
YD Kim, J Kim, RI Joh, JD Kenyon, NJ Bohmke, JM Kidd, ML Gumz, KA Esser, DL Kirkman,2024, Disrupted rest activity circadian rhythms are associated with all-cause mortality in patients with chronic kidney diseases, Chronobiology International, 41(11), 1399-1410
JS Khanduja, RI Joh, JA Paulo, CM Palmieri, J Zhang, AOD Gulka, W Hass, SP Gygi, andM Motamedi, 2024, RNA quality control factors nucleate Clr4/SUV39H and trigger constitutiveheterochromatin assembly, Cell, 187(13), 3262-3283
P Ghimire, Motamedi‡, RI Joh‡, 2024, Mathematical model for role of multiple pericentromeri repeats on heterochromatin assembly, PLoS Computatinal Biology, 20(4), e1012027
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R Moonesi Rad, B Daul, P Glass, RI Joh, CE Pemberton, A Shar, JH Kim, and D Joung, 2023, 3D Printed Magnet-Infused Origami Platform for 3D Cell Culture Assessment, Advanced Materials Technologies,8(8), 220204
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Chen N, Gabriel G, Ghose S, Lin B, Langenbucher A, Webb J, Bhanot H, Abt NB, Lin D, Varvares M, Sattler M, Elgoff AM, Joh RI, Uppaluri R, Emerick KS, Lawrence MS, Saladi SV, 2022, YAP1 maintains active chromatin state in head and neck squamous cell carcinomas that promote tumorigenesis through cooperation with BRD4, Cell Reports, 39(11), 11970-83
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RI Joh, JS Khanduja, IA Calvo, M Mistry, CM Palmieri, AJ Savol, SJH Sui, R Sadreyev, MJ Aryee, M Motamedi, 2016 Survival in quiescence requires the euchromatic deployment of Clr4/SUV39H by Argonaute-associated small RNAs, Molecular Cell, 64(6), 1088-1101
Boston Magazine Jan 24 2017
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JS Khanduja†, IA Calvo†, RI Joh†, IT Hill, M Motamedi, 2016, Nuclear noncoding RNAs and genome stability, Molecular Cell, 63(1), 7-20
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MT Cummings†, RI Joh†, M Motamedi, 2015, PRIMED: PRIMEr Database for deleting and tagging all fission and budding yeast genes developed using the open-source genome retrieval script (GRS), PLoS One, 10(2), e0116657
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RI Joh, CM Palmieri, IT Hill, M Motamedi, 2014, Regulation of histone methylation by noncoding RNAs, Biochimica et Biophysica Acta (BBA) - Gene Regulatory Mechanisms, 1839(12), 1385-1394
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RI Joh, RM Hoekstra, EJ Barzilay, A Bowen, ED Mintz, H Weiss, JS Weitz, 2013, Dynamics of Shigellosis epidemics: estimating individual-level transmission and reporting rates from national epidemiologic data sets, American Journal of Epidemiology, 178(8), 1319-1326
Honorable Mention, Applied Category, 2014 CDC/ATSDR Statistical Science Award
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RI Joh, JS Weitz, 2011, To lyse or not to lyse: transient-mediated stochastic fate determination in cells infected by bacteriophages, PLoS Computational Biology, 7(3), e1002006
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RI Joh‡, H Wang, H Weiss, JS Weitz, 2009, Dynamics of indirectly transmitted infectious diseases with immunological threshold, Bulletin of Mathematical Biology, 71(4), 845-862
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Y Mileyko, RI Joh, JS Weitz, 2008, Small-scale copy number variation and large-scale changes in gene expression, Proceedings of the National Academy of Sciences of the United States of America, 105(43), 16659-16664
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JS Weitz, Y Mileyko, RI Joh, EO Voit, 2008, Collective decision making in bacterial viruses, Biophysical Journal, 95(6), 2673-2680
Research Highlights: Nature (2008) 454: 256
Research Horizons (2008) 25(3): 6-19
Georgia Tech Research News Sep 15 2008